1HDS

MACROMOLECULAR STRUCTURE REFINEMENT BY RESTRAINED LEAST-SQUARES AND INTERACTIVE GRAPHICS AS APPLIED TO SICKLING DEER TYPE III HEMOGLOBIN


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.98 Å
  • R-Value Work:

Literature

Macromolecules
Sequence Display for 1HDS

Classification: OXYGEN TRANSPORT

Total Structure Weight: 64459.11

Macromolecule Entities
Molecule Chains Length Organism Details
HEMOGLOBIN S (DEOXY) (ALPHA CHAIN) A, C 141 Odocoileus virginianus Mutation: D6N, E27Q, E30Q, V55Q, E60Q, V70Q, D74N, D82N, D85N, D94N, T104S, S115T, D116N, S124N, D126N, V132D
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
HEMOGLOBIN S (DEOXY) (BETA CHAIN) B, D 145 Odocoileus virginianus Mutation: N18D, E25Q, E42Q, D46N, G55N, S71T, E72Q, E86Q, E89G, D98N, E100Q, V110A, V111L, L113V, E120Q, L124N, D128L, R143K
Gene Name(s): HBB Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HEM
Query on HEM

A, B, C, D PROTOPORPHYRIN IX CONTAINING FE
HEME (Synonym)
C34 H32 Fe N4 O4
KABFMIBPWCXCRK-RGGAHWMASA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.98 Å
  • R-Value Observed:
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 163.50 α = 90.00
b = 70.83 β = 94.15
c = 65.95 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1979-10-01
  • Released Date: 1979-12-07
  • Deposition author(s): Amma, E.L., Girling, R.L.

Revision History

  • Version 1_0: 1979-12-07

    Type: Initial release

  • Version 1_1: 2008-03-03

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance