1HDK

Charcot-Leyden Crystal Protein - pCMBS Complex

Structural Biology Knowledgebase: 1HDK SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.221
  • R-Value Work: 0.199

Literature

Macromolecules
Sequence Display for 1HDK

Classification: SERINE ESTERASE

Total Structure Weight: 17084.33

Macromolecule Entities
Molecule Chains Length Organism Details
EOSINOPHIL LYSOPHOSPHOLIPASE A 141 Homo sapiens EC#: 3.1.1.5 IUBMB
Details: COVALENTLY BOUND TO PCMBS
Gene Name(s): CLC Gene View LGALS10 LGALS10A
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PMB
Query on PMB

A PARA-MERCURY-BENZENESULFONIC ACID
C6 H5 Hg O3 S
KQAOIKIZSJJTII-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.221
  • R-Value Work: 0.199
  • Space Group: P 65 2 2

Unit Cell:

Length (Å) Angle (°)
a = 49.55 α = 90.00
b = 49.55 β = 90.00
c = 261.64 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-11-16
  • Released Date: 2001-11-15
  • Deposition author(s): Ackerman, S.J., Savage, M.P., Liu, L., Leonidas, D.D., Kwatia, M.A., Swaminathan, G.J., Acharya, K.R.

Revision History

  • 2015-04-15
    Type: Sequence database correspondence | Details: DBREF
  • 2015-04-15
    Type: Binding sites and description | Details: REMARK 800
  • 2015-04-15
    Type: Non-polymer description | Details: HET,FORMUL
  • 2015-04-15
    Type: Linkage | Details: LINK
  • 2015-04-15
    Type: Citation | Details: JRNL
  • 2015-04-15
    Type: Other | Details: REMARK 525
  • 2015-04-15
    Type: Atom nomenclature | Details: HETATM
  • 2015-04-15
    Type: Biological assembly | Details: REMARK 350
  • 2015-04-15
    Type: Version format compliance | Details: REMARK 4