1HDG

THE CRYSTAL STRUCTURE OF HOLO-GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE FROM THE HYPERTHERMOPHILIC BACTERIUM THERMOTOGA MARITIMA AT 2.5 ANGSTROMS RESOLUTION


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Observed: 0.166

Literature

Macromolecules
Sequence Display for 1HDG

Classification: OXIDOREDUCTASE (ALDEHY(D)-NAD(A))

Total Structure Weight: 74395.36

Macromolecule Entities
Molecule Chains Length Organism Details
HOLO-D-GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE O, Q 332 Thermotoga maritima EC#: 1.2.1.12 IUBMB
Gene Name(s): gap TM_0688
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAD
Query on NAD

O, Q NICOTINAMIDE-ADENINE-DINUCLEOTIDE
C21 H27 N7 O14 P2
BAWFJGJZGIEFAR-NNYOXOHSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

O, Q SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Observed: 0.166
  • Space Group: P 61 2 2

Unit Cell:

Length (Å) Angle (°)
a = 95.70 α = 90.00
b = 95.70 β = 90.00
c = 296.28 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1995-01-17
  • Released Date: 1995-03-31
  • Deposition author(s): Korndoerfer, I., Steipe, B., Huber, R., Tomschy, A., Jaenicke, R.

Revision History

  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4