1HD3

A-SPECTRIN SH3 DOMAIN F52Y MUTANT

Structural Biology Knowledgebase: 1HD3 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.98 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.245

Literature

Macromolecules
Sequence Display for 1HD3

Classification: CYTOSKELETON

Total Structure Weight: 7525.56

Macromolecule Entities
Molecule Chains Length Organism Details
SPECTRIN ALPHA CHAIN A 62 Gallus gallus Fragment: SH3-DOMAIN RESIDUES 964-1025
Mutation: F52Y
Gene Name(s): SPTAN1 Gene View SPTA2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.98 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.245
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 32.97 α = 90.00
b = 42.37 β = 90.00
c = 49.61 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-11-06
  • Released Date: 2001-11-01
  • Deposition author(s): Vega, M.C., Viguera, A.R., Serrano, L.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4