1H8G

C-terminal domain of the major autolysin (C-LytA) from Streptococcus pneumoniae


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.263
  • R-Value Work: 0.219

Literature

Macromolecules
Sequence Display for 1H8G

Classification: CHOLINE-BINDING DOMAIN

Total Structure Weight: 22932.71

Macromolecule Entities
Molecule Chains Length Organism Details
MAJOR AUTOLYSIN A, B 95 Streptococcus pneumoniae EC#: 3.5.1.28 IUBMB
Fragment: CHOLINE-BINDING DOMAIN
Mutation: M237M, M257M, M278M
Gene Name(s): lytA SP_1937
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CHT
Query on CHT

A, B CHOLINE ION
C5 H14 N O
OEYIOHPDSNJKLS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.263
  • R-Value Work: 0.219
  • Space Group: P 41 21 2

Unit Cell:

Length (Å) Angle (°)
a = 97.57 α = 90.00
b = 97.57 β = 90.00
c = 68.48 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-02-06
  • Released Date: 2002-01-31
  • Deposition author(s): Fernandez-Tornero, C., Garcia, E., Lopez, R., Gimenez-Gallego, G., Romero, A.

Revision History

  • 2011-05-08
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance