1H69

CRYSTAL STRUCTURE OF HUMAN NAD[P]H-QUINONE OXIDOREDUCTASE CO WITH 2,3,5,6,TETRAMETHYL-P-BENZOQUINONE (DUROQUINONE) AT 2.5 ANGSTROM RESOLUTION

Structural Biology Knowledgebase: 1H69 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.86 Å
  • R-Value Free: 0.274
  • R-Value Work: 0.229

Literature

Macromolecules
Sequence Display for 1H69

Classification: OXIDOREDUCTASE

Total Structure Weight: 127426.20

Macromolecule Entities
Molecule Chains Length Organism Details
NAD(P)H DEHYDROGENASE [QUINONE] 1 A, B, C, D 273 Homo sapiens EC#: 1.6.5.2 IUBMB
Mutation: V1A
Gene Name(s): NQO1 Gene View DIA4 NMOR1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FAD
Query on FAD

A, B, C, D FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ARH
Query on ARH

A, B, C, D 3-(HYDROXYMETHYL)-1-METHYL-5-(2-METHYLAZIRIDIN- 1-YL)-2-PHENYL-1H-INDOLE-4,7-DIONE
ARH019 (Synonym)
C19 H18 N2 O3
RQFCSAVLOHDQNB-FIKIJFGZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.86 Å
  • R-Value Free: 0.274
  • R-Value Work: 0.229
  • Space Group: P 1

Unit Cell:

Length (Å) Angle (°)
a = 55.53 α = 77.06
b = 56.91 β = 76.81
c = 97.04 γ = 86.86

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-06-08
  • Released Date: 2001-09-05
  • Deposition author(s): Faig, M., Bianchet, M.A., Chen, S., Winski, S., Ross, D., Amzel, L.M.

Revision History

  • 2014-11-12
    Type: Polymer description | Details: COMPND
  • 2014-11-12
    Type: Secondary structure | Details: SHEET
  • 2014-11-12
    Type: Citation | Details: JRNL,REMARK 1
  • 2014-11-12
    Type: Data collection | Details: REMARK 200
  • 2014-11-12
    Type: Biological assembly | Details: REMARK 300,REMARK 350
  • 2014-11-12
    Type: Version format compliance | Details: REMARK 4
  • 2014-11-12
    Type: Function and keywords | Details: KEYWDS
  • 2014-11-12
    Type: Refinement description | Details: REMARK 3
  • 2014-11-12
    Type: Other | Details: REMARK 525,MASTER,HEADER,REMARK 280,REMARK 900
  • 2014-11-12
    Type: Non-polymer description | Details: HETSYN,FORMUL
  • 2014-11-12
    Type: Geometry validation | Details: REMARK 500