1H5N

DMSO REDUCTASE MODIFIED BY THE PRESENCE OF DMS AND AIR


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.209
  • R-Value Work: 0.158

Literature

Macromolecules
Sequence Display for 1H5N

Classification: OXIDOREDUCTASE

Total Structure Weight: 182389.47

Macromolecule Entities
Molecule Chains Length Organism Details
DMSO REDUCTASE A, C 823 Rhodobacter capsulatus EC#: 1.7.2.3 IUBMB 1.8.5.3 IUBMB
Mutation: T39S, E43A, Q107E, D234E, V236I, M280D, S294E, D295G, I312E, S374A, I456V, K526A, E555Q
Gene Name(s): dorA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PGD
Query on PGD

A, C 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9- TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN- 4-ONE GUANOSINE DINUCLEOTIDE
C20 H24 N10 O13 P2 S2
SOFMTHSWCZNJTQ-ILXWUORBSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A, C SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
6MO
Query on 6MO

A, C MOLYBDENUM(VI) ION
Mo
HCNGUXXTNNIKCQ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.209
  • R-Value Work: 0.158
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 68.80 α = 90.00
b = 116.10 β = 90.00
c = 230.40 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-05-22
  • Released Date: 2002-05-17
  • Deposition author(s): Bailey, S., Adams, B., Smith, A.T., Richards, R.L., Lowe, D.J., Bray, R.C.

Revision History

  • 2012-11-14
    Type: Biological assembly | Details: REMARK 350
  • 2012-11-14
    Type: Version format compliance | Details: REMARK 4
  • 2012-11-14
    Type: Geometry validation | Details: REMARK 500
  • 2012-11-14
    Type: Linkage | Details: LINK
  • 2012-11-14
    Type: Non-polymer description | Details: FORMUL
  • 2012-11-14
    Type: Other | Details: REMARK 465,REMARK 700,REMARK 470,REMARK 525,REMARK 280
  • 2012-11-14
    Type: Sequence database correspondence | Details: DBREF
  • 2012-11-14
    Type: Secondary structure | Details: SHEET
  • 2012-11-14
    Type: Source and taxonomy | Details: SOURCE