1H5B

T CELL RECEPTOR VALPHA11 (AV11S5) DOMAIN

Structural Biology Knowledgebase: 1H5B SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.245
  • R-Value Work: 0.224

Literature

Macromolecules
Sequence Display for 1H5B

Classification: T CELL RECEPTOR

Total Structure Weight: 50071.94

Macromolecule Entities
Molecule Chains Length Organism Details
MURINE T CELL RECEPTOR (TCR) VALPHA DOMAIN A 113 Mus musculus Fragment: V-ALPHA DOMAIN VA85.33 (AV11S5-AJ17)
Details: C-TERMINAL HEXA-HISTIDINE TAG
MURINE T CELL RECEPTOR (TCR) VALPHA DOMAIN B, D 113 synthetic Fragment: V-ALPHA DOMAIN VA85.33 (AV11S5-AJ17)
Details: C-TERMINAL HEXA-HISTIDINE TAG
MURINE T CELL RECEPTOR (TCR) VALPHA DOMAIN C 113 synthetic Fragment: V-ALPHA DOMAIN VA85.33 (AV11S5-AJ17)
Details: C-TERMINAL HEXA-HISTIDINE TAG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

C GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A, B, D CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.245
  • R-Value Work: 0.224
  • Space Group: P 32 2 1

Unit Cell:

Length (Å) Angle (°)
a = 83.53 α = 90.00
b = 83.53 β = 90.00
c = 132.46 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-05-21
  • Released Date: 2001-06-21
  • Deposition author(s): Machius, M., Cianga, P., Deisenhofer, J., Ward, E.S.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4