1H4J

METHYLOBACTERIUM EXTORQUENS METHANOL DEHYDROGENASE D303E MUTANT

Structural Biology Knowledgebase: 1H4J SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.217
  • R-Value Work: 0.187

Literature

Macromolecules
Sequence Display for 1H4J

Classification: OXIDOREDUCTASE

Total Structure Weight: 298929.97

Macromolecule Entities
Molecule Chains Length Organism Details
METHANOL DEHYDROGENASE SUBUNIT 1 A, C, E, G 599 Methylobacterium extorquens EC#: 1.1.2.7 IUBMB
Mutation: D303E
Gene Name(s): moxF mxaF MexAM1_META1p4538
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
METHANOL DEHYDROGENASE SUBUNIT 2 B, D, F, H 74 Methylobacterium extorquens EC#: 1.1.2.7 IUBMB
Details: PYRROLO-QUINOLINE QUINONE PROSTHETIC GROUP WITH ACTIVE SITE CALCIUM IONS
Gene Name(s): moxI mxaI MexAM1_META1p4535
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PQQ
Query on PQQ

A, C, E, G PYRROLOQUINOLINE QUINONE
C14 H6 N2 O8
MMXZSJMASHPLLR-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A, C, E, G CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.217
  • R-Value Work: 0.187
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 101.85 α = 90.00
b = 61.02 β = 92.83
c = 212.68 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-05-11
  • Released Date: 2001-08-23
  • Deposition author(s): Mohammed, F., Gill, R., Thompson, D., Cooper, J.B., Wood, S.P., Afolabi, P.R., Anthony, C.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4