1H12

STRUCTURE OF A COLD-ADAPTED FAMILY 8 XYLANASE

Structural Biology Knowledgebase: 1H12 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.2 Å
  • R-Value Free: 0.130
  • R-Value Work: 0.107

Literature

Macromolecules
Sequence Display for 1H12

Classification: HYDROLASE

Total Structure Weight: 46325.48

Macromolecule Entities
Molecule Chains Length Organism Details
ENDO-1,4-BETA-XYLANASE A 405 Pseudoalteromonas haloplanktis EC#: 3.2.1.8 IUBMB
Gene Name(s): xyl
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
XYP
Query on XYP

A BETA-D-XYLOPYRANOSE
C5 H10 O5
SRBFZHDQGSBBOR-KKQCNMDGSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
XYS
Query on XYS

A XYLOPYRANOSE
C5 H10 O5
SRBFZHDQGSBBOR-LECHCGJUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.2 Å
  • R-Value Free: 0.130
  • R-Value Work: 0.107
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 50.97 α = 90.00
b = 90.73 β = 90.00
c = 97.58 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-07-02
  • Released Date: 2003-03-13
  • Deposition author(s): Van Petegem, F., Collins, T., Meuwis, M.A., Feller, G., Gerday, C., Van Beeumen, J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4