1H08

CDK2 IN COMPLEX WITH A DISUBSTITUTED 2, 4-BIS ANILINO PYRIMIDINE CDK4 INHIBITOR

Structural Biology Knowledgebase: 1H08 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.242
  • R-Value Work: 0.213

Literature

Macromolecules
Sequence Display for 1H08

Classification: TRANSFERASE

Total Structure Weight: 35011.66

Macromolecule Entities
Molecule Chains Length Organism Details
CELL DIVISION PROTEIN KINASE 2 A 299 Homo sapiens EC#: 2.7.11.22 IUBMB
Gene Name(s): CDK2 Gene View CDKN2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BWP
Query on BWP

A (2S)-1-{4-[(4-ANILINO-5-BROMOPYRIMIDIN-2- YL)AMINO]PHENOXY}-3-(DIMETHYLAMINO)PROPAN- 2-OL
C21 H24 Br N5 O2
MEIJADBULOETOV-KRWDZBQOSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
BYP
Query on BYP

A (2R)-1-{4-[(4-ANILINO-5-BROMOPYRIMIDIN-2- YL)AMINO]PHENOXY}-3-(DIMETHYLAMINO)PROPAN- 2-OL
C21 H24 Br N5 O2
MEIJADBULOETOV-QGZVFWFLSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
ACE
Query on ACE
A NON-POLYMER C2 H4 O --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.242
  • R-Value Work: 0.213
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 53.22 α = 90.00
b = 71.90 β = 90.00
c = 72.01 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-06-11
  • Released Date: 2003-07-11
  • Deposition author(s): Breault, G.A., Ellston, R.P.A., Green, S., James, S.R., Jewsbury, P.J., Midgley, C.J., Minshull, C.A., Pauptit, R.A., Tucker, J.A., Pease, J.E.

Revision History

  • 2011-10-12
    Type: Biological assembly | Details: REMARK 300,REMARK 350
  • 2011-10-12
    Type: Geometry validation | Details: REMARK 500
  • 2011-10-12
    Type: Binding sites and description | Details: SITE
  • 2011-10-12
    Type: Non-polymer description | Details: HETSYN,FORMUL
  • 2011-10-12
    Type: Other | Details: REMARK 525
  • 2011-10-12
    Type: Version format compliance | Details: REMARK 4