1GYL

INVOLVEMENT OF TYR24 AND TRP108 IN SUBSTRATE BINDING AND SUBSTRATE SPECIFICITY OF GLYCOLATE OXIDASE

Structural Biology Knowledgebase: 1GYL SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Observed: 0.254

Literature

Macromolecules
Sequence Display for 1GYL

Classification: OXIDOREDUCTASE (FLAVOENZYME)

Total Structure Weight: 81092.08

Macromolecule Entities
Molecule Chains Length Organism Details
GLYCOLATE OXIDASE A, B 369 Spinacia oleracea EC#: 1.1.3.15 IUBMB
Mutation: Y24F
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FMN
Query on FMN

A FLAVIN MONONUCLEOTIDE
RIBOFLAVIN MONOPHOSPHATE (Synonym)
C17 H21 N4 O9 P
FVTCRASFADXXNN-SCRDCRAPSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Observed: 0.254
  • Space Group: P 4 2 2

Unit Cell:

Length (Å) Angle (°)
a = 145.50 α = 90.00
b = 145.50 β = 90.00
c = 100.80 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1995-01-30
  • Released Date: 1995-03-31
  • Deposition author(s): Lindqvist, Y., Stenberg, K.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4