1GX8

BOVINE BETA-LACTOGLOBULIN COMPLEXED WITH RETINOL, TRIGONAL LATTICE Z

Structural Biology Knowledgebase: 1GX8 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Observed: 0.210

Literature

Macromolecules
Sequence Display for 1GX8

Classification: LIPOCALIN

Total Structure Weight: 18587.77

Macromolecule Entities
Molecule Chains Length Organism Details
BETA-LACTOGLOBULIN A 162 Bos taurus Gene Name(s): LGB
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
RTL
Query on RTL

A RETINOL
C20 H30 O
FPIPGXGPPPQFEQ-OVSJKPMPSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
RTL Kd: 36 nM (100) BindingDB

N/A in BindingMoad
Kd: 430 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Observed: 0.210
  • Space Group: P 32 2 1

Unit Cell:

Length (Å) Angle (°)
a = 53.58 α = 90.00
b = 53.58 β = 90.00
c = 110.94 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-03-29
  • Released Date: 2002-06-13
  • Deposition author(s): Kontopidis, G., Sawyer, L.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4