1GX7

BEST MODEL OF THE ELECTRON TRANSFER COMPLEX BETWEEN CYTOCHROME C3 AND [FE]-HYDROGENASE

Structural Biology Knowledgebase: 1GX7 SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR, THEORETICAL MODEL
  • Conformers Calculated: --
  • Conformers Submitted: 1
  • Selection Criteria:

wwPDB Validation report is not available for this NMR entry.


Literature

Macromolecules
Sequence Display for 1GX7

Classification: OXIDOREDUCTASE

Total Structure Weight: 65866.66

Macromolecule Entities
Molecule Chains Length Organism Details
PERIPLASMIC [FE] HYDROGENASE LARGE SUBUNIT A 371 Desulfovibrio vulgaris EC#: 1.12.7.2 IUBMB
Gene Name(s): hydA DVU_1769
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
PERIPLASMIC [FE] HYDROGENASE SMALL SUBUNIT D 88 Desulfovibrio vulgaris EC#: 1.12.7.2 IUBMB
Gene Name(s): hydB DVU_1770
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
CYTOCHROME C3 E 107 Desulfovibrio vulgaris Gene Name(s): DVU_3171
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 6 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HEC
Query on HEC

E HEME C
C34 H34 Fe N4 O4
HXQIYSLZKNYNMH-LJNAALQVSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SF4
Query on SF4

A IRON/SULFUR CLUSTER
Fe4 S4
LJBDFODJNLIPKO-VKOJMFJBAC
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PDT
Query on PDT

A 1,3-PROPANEDITHIOL
C3 H8 S2
ZJLMKPKYJBQJNH-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
FE2
Query on FE2

A FE (II) ION
Fe
CWYNVVGOOAEACU-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CMO
Query on CMO

A CARBON MONOXIDE
C O
UGFAIRIUMAVXCW-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CYN
Query on CYN

A CYANIDE ION
C N
XFXPMWWXUTWYJX-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR, THEORETICAL MODEL
  • Conformers Calculated: --
  • Conformers Submitted: 1
  • Selection Criteria: --

Structure Validation

Validation report is not available for this NMR entry.



Entry History

Deposition Data

  • Deposited Date: 2002-03-28
  • Released Date: 2003-07-31
  • Deposition author(s): Elantak, L., Morelli, X., Bornet, O., Hatchikian, C., Czjzek, M., Dolla, A., Guerlesquin, F.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4