1GRN

CRYSTAL STRUCTURE OF THE CDC42/CDC42GAP/ALF3 COMPLEX.

Structural Biology Knowledgebase: 1GRN SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.259
  • R-Value Work: 0.211

Literature

Macromolecules
Sequence Display for 1GRN

Classification: GENE REGULATION

Total Structure Weight: 44879.70

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (GTP BINDING PROTEIN) A 191 Homo sapiens Fragment: CDC42
Details: GDP, MG++, ALF3
Gene Name(s): CDC42 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
PROTEIN (RHO GTPASE ACTIVATING PROTEIN) B 203 Homo sapiens Fragment: C-TERMINAL DOMAIN OF CDC42GAP
Gene Name(s): ARHGAP1 Gene View CDC42GAP RHOGAP1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GDP
Query on GDP

A GUANOSINE-5'-DIPHOSPHATE
C10 H15 N5 O11 P2
QGWNDRXFNXRZMB-UUOKFMHZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
AF3
Query on AF3

A ALUMINUM FLUORIDE
Al F3
KLZUFWVZNOTSEM-UHFFFAOYSA-K
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.259
  • R-Value Work: 0.211
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 52.40 α = 90.00
b = 69.00 β = 90.00
c = 129.60 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-07-30
  • Released Date: 1999-12-22
  • Deposition author(s): Nassar, N., Hoffman, G.R., Clardy, J.C., Cerione, R.A.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4