1GQT

ACTIVATION OF RIBOKINASE BY MONOVALENT CATIONS


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.34 Å
  • R-Value Free: 0.257
  • R-Value Work: 0.193

Literature

Macromolecules
Sequence Display for 1GQT

Classification: TRANSFERASE

Total Structure Weight: 131930.41

Macromolecule Entities
Molecule Chains Length Organism Details
RIBOKINASE A, B, C, D 309 Escherichia coli EC#: 2.7.1.15 IUBMB
Gene Name(s): rbsK b3752 JW3731
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ACP
Query on ACP

A, B, C PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
ADENOSINE-5'-[BETA, GAMMA-METHYLENE]TRIPHOSPHATE (Synonym)
C11 H18 N5 O12 P3
UFZTZBNSLXELAL-IOSLPCCCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
RIB
Query on RIB

A, B, C, D RIBOSE
C5 H10 O5
HMFHBZSHGGEWLO-AIHAYLRMSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CS
Query on CS

A, B, C, D CESIUM ION
Cs
NCMHKCKGHRPLCM-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.34 Å
  • R-Value Free: 0.257
  • R-Value Work: 0.193
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 55.45 α = 90.00
b = 62.77 β = 90.00
c = 339.28 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-12-05
  • Released Date: 2002-01-28
  • Deposition author(s): Andersson, C.E., Mowbray, S.L.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4