1GPO

CRYSTAL STRUCTURE OF THE RATIONALLY DESIGNED ANTIBODY M41 AS A FAB FRAGMENT


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.283
  • R-Value Work: 0.214

Literature

Macromolecules
Sequence Display for 1GPO

Classification: IMMUNE SYSTEM

Total Structure Weight: 96902.78

Macromolecule Entities
Molecule Chains Length Organism Details
ANTIBODY M41 L, M 219 Mus musculus Fragment: FAB FRAGMENT
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
ANTIBODY M41 H, I 221 Mus musculus Fragment: FAB FRAGMENT
Mutation: Q3K, G32D, Y33F, N35S, K39Q, K44R, Y50F, I51V, S52Q, G54S, S56E, Y58A, E64K, Q81D, T92V, F94Y, R97N, L98W, F99H, ΔS101, ΔY102, ΔY103, ΔF104, L109V
Gene Name(s): Ighg1 Igh-4
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

H, I SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.283
  • R-Value Work: 0.214
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 96.47 α = 90.00
b = 103.51 β = 90.00
c = 113.60 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1997-03-27
  • Released Date: 1998-04-01
  • Deposition author(s): Schiweck, W., Skerra, A.

Revision History

  • Version 1_0: 1998-04-01

    Type: Initial release

  • Version 1_1: 2008-03-24

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance

  • Version 1_3: 2013-09-18

    Type: Source and taxonomy