1GL6

PLASMID COUPLING PROTEIN TRWB IN COMPLEX WITH THE NON-HYDROLYSABLE GTP ANALOGUE GDPNP

Structural Biology Knowledgebase: 1GL6 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.258
  • R-Value Work: 0.214

Literature

Macromolecules
Sequence Display for 1GL6

Classification: COUPLING PROTEIN

Total Structure Weight: 295282.13

Macromolecule Entities
Molecule Chains Length Organism Details
ATPASE A, B, D..., E, F, GA, B, D, E, F, G 436 Escherichia coli Fragment: CYTOSOLIC FRAGMENT
Details: COMPLEX WITH GDPNP.
Gene Name(s): trwB
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GNP
Query on GNP

A, B, D, E, F, G PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
C10 H17 N6 O13 P3
UQABYHGXWYXDTK-UUOKFMHZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EPE
Query on EPE

E 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
HEPES (Synonym)
C8 H18 N2 O4 S
JKMHFZQWWAIEOD-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.258
  • R-Value Work: 0.214
  • Space Group: P 31 2 1

Unit Cell:

Length (Å) Angle (°)
a = 151.60 α = 90.00
b = 151.60 β = 90.00
c = 252.00 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-08-28
  • Released Date: 2002-05-16
  • Deposition author(s): Gomis-Ruth, F.X., Moncalian, G., De La Cruz, F., Coll, M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4