1GDN

FUSARIUM OXYSPORUM TRYPSIN AT ATOMIC RESOLUTION


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 0.81 Å
  • R-Value Observed: 0.108

Literature

Macromolecules
Sequence Display for 1GDN

Classification: HYDROLASE / HYDROLASE SUBSTRATE

Total Structure Weight: 22940.25

Macromolecule Entities
Molecule Chains Length Organism Details
TRYPSIN A 224 Fusarium oxysporum EC#: 3.4.21.4 IUBMB
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
GLY-ALA-LYS B 3 synthetic

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 0.81 Å
  • R-Value Observed: 0.108
  • Space Group: P 1

Unit Cell:

Length (Å) Angle (°)
a = 33.16 α = 102.19
b = 36.76 β = 104.70
c = 39.62 γ = 102.91

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-09-28
  • Released Date: 2001-02-07
  • Deposition author(s): Rypniewski, W.R., Oestergaard, P., Noerregaard-Madsen, M., Dauter, M., Wilson, K.S.

Revision History

  • 2008-04-27
    Type: Version format compliance
  • 2011-07-13
    Type: Atomic model, Database references, Derived calculations, Non-polymer description, Structure summary, Version format compliance