1GC4

THERMUS THERMOPHILUS ASPARTATE AMINOTRANSFERASE TETRA MUTANT 2 COMPLEXED WITH ASPARTATE

Structural Biology Knowledgebase: 1GC4 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.3 Å
  • R-Value Free: 0.277
  • R-Value Work: 0.217

Literature

Macromolecules
Sequence Display for 1GC4

Classification: TRANSFERASE

Total Structure Weight: 170150.63

Macromolecule Entities
Molecule Chains Length Organism Details
ASPARTATE AMINOTRANSFERASE A, B, C, D 385 Thermus thermophilus EC#: 2.6.1.1 IUBMB
Mutation: S14D, T16V, K101S, S261R
Gene Name(s): aspC TTHA0046
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PLP
Query on PLP

A, B, C, D PYRIDOXAL-5'-PHOSPHATE
VITAMIN B6 Phosphate (Synonym)
C8 H10 N O6 P
NGVDGCNFYWLIFO-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ASP
Query on ASP

A, B, C, D ASPARTIC ACID
C4 H7 N O4
CKLJMWTZIZZHCS-REOHCLBHSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.3 Å
  • R-Value Free: 0.277
  • R-Value Work: 0.217
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 82.67 α = 90.00
b = 102.34 β = 112.14
c = 100.41 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-07-19
  • Released Date: 2001-09-05
  • Deposition author(s): Ura, H., Nakai, T., Hirotsu, K., Kuramitsu, S.

Revision History

  • 2011-07-13
    Type: Source and taxonomy | Details: Removed strain from scientific name
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4