1G6D

STRUCTURE OF PEPTIDYL-D(CGCAATTGCG) IN THE PRESENCE OF ZINC IONS

Structural Biology Knowledgebase: 1G6D SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.213
  • R-Value Work: 0.208

Literature

Macromolecules
Sequence Display for 1G6D

Classification: DNA

Total Structure Weight: 3241.17

Macromolecule Entities
Molecule Chains Length Organism Details
PEPTIDYL-D(CGCAATTGCG) A 10 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.213
  • R-Value Work: 0.208
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 27.92 α = 90.00
b = 44.09 β = 90.00
c = 53.22 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2000-11-04
  • Released Date: 2002-04-19
  • Deposition author(s): Soler-Lopez, M., Malinina, L., Tereshko, V., Zarytova, V., Subirana, J.A.

Revision History

  • 2011-11-16
    Type: Atom occupancy | Details: Atom occupancy
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4