1G5I

CRYSTAL STRUCTURE OF THE ACCESSORY SUBUNIT OF MURINE MITOCHONDRIAL POLYMERASE GAMMA

Structural Biology Knowledgebase: 1G5I SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.233
  • R-Value Work: 0.189

Literature

Macromolecules
Sequence Display for 1G5I

Classification: DNA BINDING PROTEIN

Total Structure Weight: 204498.23

Macromolecule Entities
Molecule Chains Length Organism Details
MITOCHONDRIAL DNA POLYMERASE ACCESSORY SUBUNIT A, B, C, D 454 Mus musculus EC#: 2.7.7.7 IUBMB
Gene Name(s): Polg2 Mtpolb
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

B, D GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NA
Query on NA

A, B, C, D SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.233
  • R-Value Work: 0.189
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 96.74 α = 90.00
b = 134.01 β = 90.00
c = 135.14 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-11-01
  • Released Date: 2001-03-14
  • Deposition author(s): Carrodeguas, J.A., Theis, K., Bogenhagen, D.F., Kisker, C.

Revision History

  • 2011-07-13
    Type: Non-polymer description | Details: chemical name/synonym update
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4