1G3M

CRYSTAL STRUCTURE OF HUMAN ESTROGEN SULFOTRANSFERASE IN COMPLEX WITH IN-ACTIVE COFACTOR PAP AND 3,5,3',5'-TETRACHLORO-BIPHENYL-4,4'-DIOL

Structural Biology Knowledgebase: 1G3M SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.219
  • R-Value Work: 0.193

Literature

Macromolecules
Sequence Display for 1G3M

Classification: TRANSFERASE

Total Structure Weight: 72104.03

Macromolecule Entities
Molecule Chains Length Organism Details
ESTROGEN SULFOTRANSFERASE A, B 294 Homo sapiens EC#: 2.8.2.4 IUBMB
Gene Name(s): SULT1E1 Gene View STE
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
A3P
Query on A3P

A, B ADENOSINE-3'-5'-DIPHOSPHATE
C10 H15 N5 O10 P2
WHTCPDAXWFLDIH-KQYNXXCUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PCQ
Query on PCQ

A, B 3,5,3',5'-TETRACHLORO-BIPHENYL-4,4'-DIOL
C12 H6 Cl4 O2
YCYDXOVJXVALHY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

A 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
PCQ N/A in BindingDB
IC50: 0.15 nM  BindingMOAD
IC50: 0.10 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.219
  • R-Value Work: 0.193
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 62.69 α = 90.00
b = 96.89 β = 92.58
c = 61.72 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-10-24
  • Released Date: 2003-07-22
  • Deposition author(s): Shevtsov, S., Petrochenko, E.V., Negishi, M., Pedersen, L.C.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4