1G2L

FACTOR XA INHIBITOR COMPLEX


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.272
  • R-Value Work: 0.237

Literature

Macromolecules
Sequence Display for 1G2L

Classification: HYDROLASE

Total Structure Weight: 37411.34

Macromolecule Entities
Molecule Chains Length Organism Details
COAGULATION FACTOR X A 235 Homo sapiens EC#: 3.4.21.6 IUBMB
Fragment: CATALYTIC DOMAIN
Gene Name(s): F10 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
COAGULATION FACTOR X B 94 Homo sapiens EC#: 3.4.21.6 IUBMB
Fragment: DES-GLA FRAGMENT
Gene Name(s): F10 Gene View

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
T87
Query on T87

A [(1-{2[(4-CARBAMIMIDOYL-PHENYLAMINO)-METHYL]- 1-METHYL-1H-BENZOIMIDAZOL-5-YL}-CYCLOPROPYL)- PYRIDIN-2-YL-METHYLENEAMINOOXY]-ACETIC ACID ETHYL ESTER
C29 H31 N7 O3
RNOYCNIZOAIUSV-LSWMGQQCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
T87 Ki: 57 nM (100) BindingDB

Ki: 57 nM  BindingMOAD
Ki: 57 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.272
  • R-Value Work: 0.237
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 56.16 α = 90.00
b = 72.66 β = 90.00
c = 76.68 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-10-20
  • Released Date: 2001-10-20
  • Deposition author(s): Nar, H.

Revision History

  • Version 1_0: 2001-10-20

    Type: Initial release

  • Version 1_1: 2008-04-27

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance