1FY8

CRYSTAL STRUCTURE OF THE DELTAILE16VAL17 RAT ANIONIC TRYPSINOGEN-BPTI COMPLEX

Structural Biology Knowledgebase: 1FY8 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.214
  • R-Value Work: 0.183

Literature

Macromolecules
Sequence Display for 1FY8

Classification: hydrolase / hydrolase inhibitor

Total Structure Weight: 31591.68

Macromolecule Entities
Molecule Chains Length Organism Details
TRYPSIN II, ANIONIC E 231 Rattus rattus EC#: 3.4.21.4 IUBMB
Mutation: V6E, ΔI24, ΔV25
Gene Name(s): Prss2 Try2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
PANCREATIC TRYPSIN INHIBITOR I 58 Bos taurus Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

I SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

E CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.214
  • R-Value Work: 0.183
  • Space Group: P 32 2 1

Unit Cell:

Length (Å) Angle (°)
a = 92.60 α = 90.00
b = 92.60 β = 90.00
c = 62.06 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-09-28
  • Released Date: 2000-11-08
  • Deposition author(s): Pasternak, A., White, A., Jeffery, C.J., Ringe, D., Hedstrom, L.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4