1FW8

CIRCULARLY PERMUTED PHOSPHOGLYCERATE KINASE FROM YEAST: PGK P72

Structural Biology Knowledgebase: 1FW8 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.324
  • R-Value Work: 0.211

Literature

Macromolecules
Sequence Display for 1FW8

Classification: TRANSFERASE

Total Structure Weight: 45022.99

Macromolecule Entities
Molecule Chains Length Organism Details
PHOSPHOGLYCERATE KINASE A 416 Saccharomyces cerevisiae EC#: 2.7.2.3 IUBMB
Mutation: E1S
Gene Name(s): PGK1 Gene View YCR012W YCR12W
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
ACE
Query on ACE
A NON-POLYMER C2 H4 O --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.324
  • R-Value Work: 0.211
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 85.74 α = 90.00
b = 104.77 β = 90.00
c = 44.34 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-09-22
  • Released Date: 2001-03-22
  • Deposition author(s): Tougard, P., Bizebard, T., Ritco-Vonsovici, M., Minard, P., Desmadril, M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Non-polymer description | Details: chemical name/synonym update