1FN8

FUSARIUM OXYSPORUM TRYPSIN AT ATOMIC RESOLUTION

Structural Biology Knowledgebase: 1FN8 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 0.81 Å
  • R-Value Observed: 0.108

Literature

Macromolecules
Sequence Display for 1FN8

Classification: HYDROLASE / HYDROLASE SUBSTRATE

Total Structure Weight: 22968.39

Macromolecule Entities
Molecule Chains Length Organism Details
TRYPSIN A 224 Fusarium oxysporum EC#: 3.4.21.4 IUBMB
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
GLY-ALA-ARG B 3 synthetic

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 0.81 Å
  • R-Value Observed: 0.108
  • Space Group: P 1

Unit Cell:

Length (Å) Angle (°)
a = 33.15 α = 102.09
b = 36.70 β = 104.75
c = 39.56 γ = 103.01

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-08-21
  • Released Date: 2001-02-07
  • Deposition author(s): Rypniewski, W.R., Oestergaard, P., Noerregaard-Madsen, M., Dauter, M., Wilson, K.S.

Revision History

  • 2011-07-13
    Type: Linkage | Details: Linkage
  • 2011-07-13
    Type: Sequence database correspondence | Details: Sequence database correspondence
  • 2011-07-13
    Type: Polymer description | Details: Changed inhibitor presentation or chemistry
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Atom nomenclature | Details: Atom nomenclature
  • 2011-07-13
    Type: Binding sites and description | Details: Binding sites and description
  • 2011-07-13
    Type: Non-polymer description | Details: Non-polymer description
  • 2011-07-13
    Type: Function and keywords | Details: Function and keywords