1FMX

STRUCTURE OF NATIVE PROTEINASE A IN THE SPACE GROUP P21

Structural Biology Knowledgebase: 1FMX SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.61 Å
  • R-Value Free: 0.279
  • R-Value Work: 0.205

Literature

Macromolecules
Sequence Display for 1FMX

Classification: HYDROLASE

Total Structure Weight: 73003.21

Macromolecule Entities
Molecule Chains Length Organism Details
SACCHAROPEPSIN A, B 329 Saccharomyces cerevisiae EC#: 3.4.23.25 IUBMB
Gene Name(s): PEP4 PHO9 PRA1 YPL154C P2585
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

A, B N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
BMA
Query on BMA

A BETA-D-MANNOSE
C6 H12 O6
WQZGKKKJIJFFOK-RWOPYEJCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.61 Å
  • R-Value Free: 0.279
  • R-Value Work: 0.205
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 82.96 α = 90.00
b = 49.07 β = 96.50
c = 94.68 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-08-18
  • Released Date: 2002-07-31
  • Deposition author(s): Gustchina, A., Li, M., Phylip, L.H., Lees, W.E., Kay, J., Wlodawer, A.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Non-polymer description | Details: chemical name/synonym update