1FLM

DIMER OF FMN-BINDING PROTEIN FROM DESULFOVIBRIO VULGARIS (MIYAZAKI F)

Structural Biology Knowledgebase: 1FLM SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.3 Å
  • R-Value Observed: 0.150

Literature

Macromolecules
Sequence Display for 1FLM

Classification: ELECTRON TRANSPORT

Total Structure Weight: 27219.07

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (FMN-BINDING PROTEIN) A, B 122 Desulfovibrio vulgaris Gene Name(s): DvMF_2023
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FMN
Query on FMN

A, B FLAVIN MONONUCLEOTIDE
RIBOFLAVIN MONOPHOSPHATE (Synonym)
C17 H21 N4 O9 P
FVTCRASFADXXNN-SCRDCRAPSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
FMN N/A in BindingDB
Kd: 0.43 nM  BindingMOAD
Kd: 0.43 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.3 Å
  • R-Value Observed: 0.150
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 37.23 α = 90.00
b = 84.60 β = 94.10
c = 41.11 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-03-10
  • Released Date: 2000-03-06
  • Deposition author(s): Suto, K., Kawagoe, K., Shibata, N., Morimoto, K., Higuchi, Y., Kitamura, M., Nakaya, T., Yasuoka, N.

Revision History

  • 2014-11-26
    Type: Other | Details: Correct solvent content
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4