1FH8

CRYSTAL STRUCTURE OF THE XYLANASE CEX WITH XYLOBIOSE-DERIVED ISOFAGOMINE INHIBITOR

Structural Biology Knowledgebase: 1FH8 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.224
  • R-Value Work: 0.190

Literature

Macromolecules
Sequence Display for 1FH8

Classification: HYDROLASE

Total Structure Weight: 34301.49

Macromolecule Entities
Molecule Chains Length Organism Details
BETA-1,4-XYLANASE A 312 Cellulomonas fimi EC#: 3.2.1.91 IUBMB
Fragment: CATALYTIC DOMAIN
Gene Name(s): cex xynB
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
XYP
Query on XYP

A BETA-D-XYLOPYRANOSE
C5 H10 O5
SRBFZHDQGSBBOR-KKQCNMDGSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
XIF
Query on XIF

A PIPERIDINE-3,4-DIOL
XYLOSE-DERIVED ISOFAGOMINE (Synonym)
C5 H11 N O2
IZXWMVPZODQBRB-RFZPGFLSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.224
  • R-Value Work: 0.190
  • Space Group: P 41 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 85.31 α = 90.00
b = 85.31 β = 90.00
c = 79.10 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-07-31
  • Released Date: 2000-08-23
  • Deposition author(s): Notenboom, V., Williams, S.J., Hoos, R., Withers, S.G., Rose, D.R.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4