1F9Z

CRYSTAL STRUCTURE OF THE NI(II)-BOUND GLYOXALASE I FROM ESCHERICHIA COLI

Structural Biology Knowledgebase: 1F9Z SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.272
  • R-Value Work: 0.205

Literature

Macromolecules
Sequence Display for 1F9Z

Classification: LYASE

Total Structure Weight: 29991.29

Macromolecule Entities
Molecule Chains Length Organism Details
GLYOXALASE I A, B 135 Escherichia coli EC#: 4.4.1.5 IUBMB
Gene Name(s): gloA b1651 JW1643
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NI
Query on NI

A NICKEL (II) ION
Ni
VEQPNABPJHWNSG-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.272
  • R-Value Work: 0.205
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 46.05 α = 90.00
b = 56.48 β = 95.44
c = 46.71 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-07-11
  • Released Date: 2000-09-20
  • Deposition author(s): He, M.M., Clugston, S.L., Honek, J.F., Matthews, B.W.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4