1F1G

Crystal structure of yeast cuznsod exposed to nitric oxide

Structural Biology Knowledgebase: 1F1G SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.35 Å
  • R-Value Work: 0.171

Literature

Macromolecules
Sequence Display for 1F1G

Classification: OXIDOREDUCTASE

Total Structure Weight: 96591.66

Macromolecule Entities
Molecule Chains Length Organism Details
COPPER-ZINC SUPEROXIDE DISMUTASE A, B, C..., D, E, FA, B, C, D, E, F 154 Saccharomyces cerevisiae EC#: 1.15.1.1 IUBMB
Gene Name(s): SOD1 Gene View YJR104C J1968
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PO4
Query on PO4

A, B, C, D, E, F PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A, B, C, D, E, F ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CU
Query on CU

A, B, C, D, E, F COPPER (II) ION
Cu
JPVYNHNXODAKFH-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.35 Å
  • R-Value Observed:
  • Space Group: P 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 72.50 α = 109.20
b = 72.48 β = 109.55
c = 72.47 γ = 109.21

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-05-18
  • Released Date: 2002-12-12
  • Deposition author(s): Hart, P.J., Ogihara, N.L., Liu, H., Nersissian, A.M., Valentine, J.S., Eisenberg, D.

Revision History

  • 2014-02-12
    Type: Biological assembly | Details: update biological assembly info
  • 2014-02-05
    Type: Citation | Details: citation update
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4