1EWJ

CRYSTAL STRUCTURE OF BLEOMYCIN-BINDING PROTEIN COMPLEXED WITH BLEOMYCIN


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.302
  • R-Value Work: 0.218

Literature

Macromolecules
Sequence Display for 1EWJ

Classification: ANTIBIOTIC INHIBITOR

Total Structure Weight: 124011.96

Macromolecule Entities
Molecule Chains Length Organism Details
BLEOMYCIN RESISTANCE DETERMINANT A, B, C..., D, E, F, G, HA, B, C, D, E, F, G, H 126 Klebsiella pneumoniae Fragment: CORE DOMAIN
Gene Name(s): ble
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BLM
Query on BLM

A, B, C, D, E, F, G, H BLEOMYCIN A2
N1-[3-(DIMETHYLSULFONIO)-PROPYL]BLEOMYCINAMIDE (Synonym)
C55 H85 N17 O21 S3
ZGCQRJQBETWECF-UAPAGMARSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
BLM N/A in BindingDB
N/A in BindingMoad
Kd: 32 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.302
  • R-Value Work: 0.218
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 115.27 α = 90.00
b = 117.00 β = 90.00
c = 79.86 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-04-26
  • Released Date: 2001-04-26
  • Deposition author(s): Maruyama, M., Kumagai, T., Matoba, Y., Hata, Y., Sugiyama, M.

Revision History

  • Version 1_0: 2001-04-26

    Type: Initial release

  • Version 1_1: 2008-04-27

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance

  • Version 1_3: 2017-10-04

    Type: Refinement description