1EVI

THREE-DIMENSIONAL STRUCTURE OF THE PURPLE INTERMEDIATE OF PORCINE KIDNEY D-AMINO ACID OXIDASE


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.298
  • R-Value Work: 0.232

Literature

Macromolecules
Sequence Display for 1EVI

Classification: OXIDOREDUCTASE

Total Structure Weight: 79023.14

Macromolecule Entities
Molecule Chains Length Organism Details
D-AMINO ACID OXIDASE A, B 340 Sus scrofa EC#: 1.4.3.3 IUBMB
Gene Name(s): DAO Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FAD
Query on FAD

A, B FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
2PC
Query on 2PC

A, B 3,4-DIHYDRO-2H-PYRROLIUM-5-CARBOXYLATE
C5 H7 N O2
RHTAIKJZSXNELN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.298
  • R-Value Work: 0.232
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 107.73 α = 90.00
b = 91.37 β = 90.00
c = 71.24 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-04-20
  • Released Date: 2000-10-23
  • Deposition author(s): Mizutani, H., Miyahara, I., Hirotsu, K., Nishina, Y., Shiga, K., Setoyama, C., Miura, R.

Revision History

  • Version 1_0: 2000-10-23

    Type: Initial release

  • Version 1_1: 2008-04-27

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance

  • Version 1_3: 2017-10-04

    Type: Refinement description