1EVE

THREE DIMENSIONAL STRUCTURE OF THE ANTI-ALZHEIMER DRUG, E2020 (ARICEPT), COMPLEXED WITH ITS TARGET ACETYLCHOLINESTERASE

Structural Biology Knowledgebase: 1EVE SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.228
  • R-Value Work: 0.188

Literature

Macromolecules
Sequence Display for 1EVE

Classification: SERINE HYDROLASE

Total Structure Weight: 62793.29

Macromolecule Entities
Molecule Chains Length Organism Details
ACETYLCHOLINESTERASE A 543 Tetronarce californica EC#: 3.1.1.7 IUBMB
Gene Name(s): ache
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
E20
Query on E20

A 1-BENZYL-4-[(5,6-DIMETHOXY-1-INDANON-2-YL)METHYL]PIPERIDINE
E2020 (Synonym)
C24 H29 N O3
ADEBPBSSDYVVLD-HXUWFJFHSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NAG
Query on NAG

A N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
E20 N/A in BindingDB
IC50: 5.7 nM  BindingMOAD
IC50: 5.7 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.228
  • R-Value Work: 0.188
  • Space Group: P 31 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 111.93 α = 90.00
b = 111.93 β = 90.00
c = 136.90 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-03-04
  • Released Date: 1999-01-20
  • Deposition author(s): Kryger, G., Silman, I., Sussman, J.L.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Non-polymer description | Details: chemical name/synonym update