1EQU

TYPE 1 17-BETA HYDROXYSTEROID DEHYDROGENASE EQUILIN COMPLEXED WITH NADP+

Structural Biology Knowledgebase: 1EQU SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.315
  • R-Value Work: 0.182

Literature

Macromolecules
Sequence Display for 1EQU

Classification: OXIDOREDUCTASE

Total Structure Weight: 71531.38

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (ESTRADIOL 17 BETA-DEHYDROGENASE 1) A, B 327 Homo sapiens EC#: 1.1.1.62 IUBMB
Gene Name(s): HSD17B1 Gene View E17KSR EDH17B1 EDH17B2 EDHB17 SDR28C1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAP
Query on NAP

A, B NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE (Synonym)
C21 H28 N7 O17 P3
XJLXINKUBYWONI-NNYOXOHSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EQI
Query on EQI

A EQUILIN
C18 H20 O2
WKRLQDKEXYKHJB-HFTRVMKXSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.315
  • R-Value Work: 0.182
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 44.02 α = 90.00
b = 114.16 β = 90.00
c = 114.84 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-12-02
  • Released Date: 1999-12-02
  • Deposition author(s): Sawicki, M.W., Erman, M., Puranen, T., Vihko, P., Ghosh, D.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4