1EP5

CRYSTAL STRUCTURE OF THE CONSERVED CORE DOMAIN OF VENEZUALAN EQUINE ENCEPHALITIS CAPSID PROTEIN

Structural Biology Knowledgebase: 1EP5 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.263
  • R-Value Work: 0.228

Literature

Macromolecules
Sequence Display for 1EP5

Classification: HYDROLASE

Total Structure Weight: 53091.77

Macromolecule Entities
Molecule Chains Length Organism Details
CAPSID PROTEIN C A, B, C 157 Venezuelan equine encephalitis virus EC#: 3.4.21 IUBMB
Fragment: C-TERMINAL DOMAIN
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
URE
Query on URE

A, B UREA
C H4 N2 O
XSQUKJJJFZCRTK-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.263
  • R-Value Work: 0.228
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 69.33 α = 90.00
b = 75.18 β = 90.00
c = 94.66 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-03-27
  • Released Date: 2003-07-08
  • Deposition author(s): Watowich, S.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4