1EMH

CRYSTAL STRUCTURE OF HUMAN URACIL-DNA GLYCOSYLASE BOUND TO UNCLEAVED SUBSTRATE-CONTAINING DNA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.233
  • R-Value Work: 0.216

Literature

Macromolecules
Sequence Display for 1EMH

Classification: hydrolase / DNA

Total Structure Weight: 31311.98


Macromolecule Entities
Molecule Chains Length Organism Details
URACIL-DNA GLYCOSYLASE A 223 Homo sapiens EC#: 3.2.2.27 IUBMB
Mutation: P82M, V83E, G84F
Details: MITOCHONDRIAL PROTEIN
Gene Name(s): UNG Gene View DGU UNG1 UNG15
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*TP*GP*TP*(P2U)P*AP*TP*CP*TP*T)-3') B 9 synthetic
DNA (5'-D(*AP*AP*AP*GP*AP*TP*AP*AP*CP*A)-3') C 10 synthetic

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
P2U
Query on P2U
B DNA LINKING C9 H13 N2 O8 P DU

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.233
  • R-Value Work: 0.216
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 48.65 α = 90.00
b = 64.82 β = 90.00
c = 94.96 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-03-16
  • Released Date: 2000-05-16
  • Deposition author(s): Parikh, S.S., Slupphaug, G., Krokan, H.E., Blackburn, G.M., Tainer, J.A.

Revision History

  • 2008-04-27
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance