1EJB

LUMAZINE SYNTHASE FROM SACCHAROMYCES CEREVISIAE

Structural Biology Knowledgebase: 1EJB SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.225
  • R-Value Work: 0.197

Literature

Macromolecules
Sequence Display for 1EJB

Classification: TRANSFERASE

Total Structure Weight: 94299.02

Macromolecule Entities
Molecule Chains Length Organism Details
LUMAZINE SYNTHASE A, B, C, D, E 168 Saccharomyces cerevisiae EC#: 2.5.1.78 IUBMB
Mutation: V43A, K50N
Gene Name(s): RIB4 YOL143C
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
INJ
Query on INJ

A, B, C, D, E 5-(6-D-RIBITYLAMINO-2,4-DIHYDROXYPYRIMIDIN- 5-YL)-1-PENTYL-PHOSPHONIC ACID
C14 H26 N3 O9 P
BMATWAHJJFXMFA-AXFHLTTASA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.225
  • R-Value Work: 0.197
  • Space Group: P 41 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 82.89 α = 90.00
b = 82.89 β = 90.00
c = 298.84 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-03-02
  • Released Date: 2001-03-02
  • Deposition author(s): Meining, W., Mortl, S., Fischer, M., Cushman, M., Bacher, A., Ladenstein, R.

Revision History

  • 2013-01-16
    Type: Polymer description | Details: --
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4