1EHH

CRYSTAL STRUCTURE OF URTICA DIOICA AGGLUTININ ISOLECTIN VI COMPLEX WITH TRI-N-ACETYLCHITOTRIOSE


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.253
  • R-Value Work: 0.183

Literature

Macromolecules
Sequence Display for 1EHH

Classification: PLANT PROTEIN

Total Structure Weight: 20025.94

Macromolecule Entities
Molecule Chains Length Organism Details
AGGLUTININ ISOLECTIN VI A, B 89 Urtica dioica Mutation: Q1X, S10A, N81K
Gene Name(s): chia5.5.2 chia5.5.1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

A, B N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
PCA
Query on PCA
A, B L-PEPTIDE LINKING C5 H7 N O3 GLU

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.253
  • R-Value Work: 0.183
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 25.55 α = 90.00
b = 56.79 β = 92.68
c = 55.30 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-02-21
  • Released Date: 2000-04-05
  • Deposition author(s): Harata, K., Muraki, M.

Revision History

  • Version 1_0: 2000-04-05

    Type: Initial release

  • Version 1_1: 2008-04-27

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Non-polymer description, Version format compliance

  • Version 1_3: 2017-10-04

    Type: Refinement description