1EFO

CRYSTAL STRUCTURE OF AN ADENINE BULGE IN THE RNA CHAIN OF A DNA/RNA HYBRID, D(CTCCTCTTC)/R(GAAGAGAGAG)

Structural Biology Knowledgebase: 1EFO SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.222
  • R-Value Work: 0.199

Literature

Macromolecules
Sequence Display for 1EFO

Classification: DNA-RNA HYBRID

Total Structure Weight: 5944.87

Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*CP*TP*CP*CP*TP*CP*TP*TP*C)-3') A 9 synthetic
RNA (5'-R(*GP*AP*AP*GP*AP*GP*AP*GP*AP*G)-3') B 10 synthetic


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.222
  • R-Value Work: 0.199
  • Space Group: I 2 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 46.66 α = 90.00
b = 47.61 β = 90.00
c = 54.04 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2000-02-09
  • Released Date: 2000-05-29
  • Deposition author(s): Sudarsanakumar, C., Xiong, Y., Sundaralingam, M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4