1EEH

UDP-N-ACETYLMURAMOYL-L-ALANINE:D-GLUTAMATE LIGASE

Structural Biology Knowledgebase: 1EEH SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.219

Literature

Macromolecules
Sequence Display for 1EEH

Classification: LIGASE

Total Structure Weight: 47640.21

Macromolecule Entities
Molecule Chains Length Organism Details
UDP-N-ACETYLMURAMOYL-L-ALANINE:D-GLUTAMATE LIGASE A 437 Escherichia coli EC#: 6.3.2.9 IUBMB
Gene Name(s): murD b0088 JW0086
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
UMA
Query on UMA

A URIDINE-5'-DIPHOSPHATE-N-ACETYLMURAMOYL-L- ALANINE
C23 H36 N4 O20 P2
NTMMCWJNQNKACG-KBKUWGQMSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.219
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 58.84 α = 90.00
b = 63.28 β = 90.00
c = 114.91 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-01-31
  • Released Date: 2001-01-17
  • Deposition author(s): Bertrand, J.A., Fanchon, E., Martin, L., Chantalat, L., Auger, G., Blanot, D., van Heijenoort, J., Dideberg, O.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4