1EE9

CRYSTAL STRUCTURE OF THE NAD-DEPENDENT 5,10-METHYLENETETRAHYDROFOLATE DEHYDROGENASE FROM SACCHAROMYCES CEREVISIAE COMPLEXED WITH NAD

Structural Biology Knowledgebase: 1EE9 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.360
  • R-Value Work: 0.248

Literature

Macromolecules
Sequence Display for 1EE9

Classification: OXIDOREDUCTASE

Total Structure Weight: 36948.31

Macromolecule Entities
Molecule Chains Length Organism Details
5,10-METHYLENETETRAHYDROFOLATE DEHYDROGENASE A 320 Saccharomyces cerevisiae EC#: 1.5.1.15 IUBMB
Gene Name(s): MTD1 YKR080W YKR400
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAD
Query on NAD

A NICOTINAMIDE-ADENINE-DINUCLEOTIDE
C21 H27 N7 O14 P2
BAWFJGJZGIEFAR-NNYOXOHSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.360
  • R-Value Work: 0.248
  • Space Group: P 41 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 73.60 α = 90.00
b = 73.60 β = 90.00
c = 161.60 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-01-31
  • Released Date: 2000-12-06
  • Deposition author(s): Monzingo, A.F., Breksa, A., Ernst, S., Appling, D.R., Robertus, J.D.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4