1EB6

DEUTEROLYSIN FROM ASPERGILLUS ORYZAE

Structural Biology Knowledgebase: 1EB6 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.0 Å
  • R-Value Free: 0.126
  • R-Value Work: 0.104

Literature

Macromolecules
Sequence Display for 1EB6

Classification: HYDROLASE

Total Structure Weight: 19283.25

Macromolecule Entities
Molecule Chains Length Organism Details
NEUTRAL PROTEASE II A 177 Aspergillus oryzae EC#: 3.4.24.39 IUBMB
Gene Name(s): AO090010000493
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

A 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.0 Å
  • R-Value Free: 0.126
  • R-Value Work: 0.104
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 38.43 α = 90.00
b = 34.76 β = 106.03
c = 60.28 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-07-19
  • Released Date: 2001-11-23
  • Deposition author(s): Mcauley, K.E., Jia-Xing, Y., Dodson, E.J., Lehmbeck, J., Ostergaard, P.R., Wilson, K.S.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4