1E8H

STRUCTURE OF THE H61T MUTANT OF THE FLAVOENZYME VANILLYL-ALCOHOL OXIDASE IN THE APO FORM COMPLEXED BY ADP

Structural Biology Knowledgebase: 1E8H SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.303
  • R-Value Work: 0.237

Literature

Macromolecules
Sequence Display for 1E8H

Classification: OXIDOREDUCTASE

Total Structure Weight: 126795.52

Macromolecule Entities
Molecule Chains Length Organism Details
VANILLYL-ALCOHOL OXIDASE A, B 560 Penicillium simplicissimum EC#: 1.1.3.38 IUBMB
Mutation: H61T
Gene Name(s): VAOA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ADP
Query on ADP

A, B ADENOSINE-5'-DIPHOSPHATE
C10 H15 N5 O10 P2
XTWYTFMLZFPYCI-KQYNXXCUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
ADP N/A in BindingDB
N/A in BindingMoad
Kd: 2100 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.303
  • R-Value Work: 0.237
  • Space Group: I 4
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 130.34 α = 90.00
b = 130.34 β = 90.00
c = 134.00 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-09-20
  • Released Date: 2000-09-21
  • Deposition author(s): Mattevi, A., Fraaije, M.W.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4