1E7Z

Crystal structure of the EMAP2/RNA binding domain of the p43 protein from human aminoacyl-tRNA synthetase complex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.05 Å
  • R-Value Free: 0.272
  • R-Value Work: 0.221

Literature

Macromolecules
Sequence Display for 1E7Z

Classification: RNA BINDING DOMAIN

Total Structure Weight: 19698.51

Macromolecule Entities
Molecule Chains Length Organism Details
ENDOTHELIAL-MONOCYTE ACTIVATING POLYPEPTIDE II A 174 Homo sapiens Fragment: C-TERMINAL DOMAIN/RNA BINDING DOMAIN RESIDUES 147-312
Mutation: S147A
Gene Name(s): AIMP1 Gene View EMAP2 SCYE1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HG
Query on HG

A MERCURY (II) ION
Hg
BQPIGGFYSBELGY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.05 Å
  • R-Value Free: 0.272
  • R-Value Work: 0.221
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 36.14 α = 90.00
b = 53.94 β = 111.92
c = 41.37 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-09-13
  • Released Date: 2000-11-27
  • Deposition author(s): Pasqualato, S., Kerjan, P., Renault, L., Menetrey, J., Mirande, M., Cherfils, J.

Revision History

  • Version 1_0: 2000-11-27

    Type: Initial release

  • Version 1_1: 2011-05-08

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance