1E3I

Mouse class II alcohol dehydrogenase complex with NADH and inhibitor

Structural Biology Knowledgebase: 1E3I SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.08 Å
  • R-Value Free: 0.228
  • R-Value Work: 0.198

Literature

Macromolecules
Sequence Display for 1E3I

Classification: OXIDOREDUCTASE

Total Structure Weight: 82036.33

Macromolecule Entities
Molecule Chains Length Organism Details
ALCOHOL DEHYDROGENASE, CLASS II A, B 376 Mus musculus EC#: 1.1.1.1 IUBMB
Gene Name(s): Adh4
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAI
Query on NAI

A, B 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE
NADH (Synonym)
C21 H29 N7 O14 P2
BOPGDPNILDQYTO-NNYOXOHSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CXF
Query on CXF

A, B CYCLOHEXYLFORMAMIDE
C7 H13 N O
SWGXDLRCJNEEGZ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A, B ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.08 Å
  • R-Value Free: 0.228
  • R-Value Work: 0.198
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 79.25 α = 90.00
b = 81.07 β = 90.00
c = 102.19 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-06-16
  • Released Date: 2000-09-12
  • Deposition author(s): Svensson, S., Hoog, J.O., Schneider, G., Sandalova, T.

Revision History

  • 2013-10-30
    Type: Citation | Details: REMARK 1,JRNL
  • 2013-10-30
    Type: Secondary structure | Details: SHEET
  • 2013-10-30
    Type: Linkage | Details: CONECT,LINK
  • 2013-10-30
    Type: Biological assembly | Details: REMARK 300,REMARK 350
  • 2013-10-30
    Type: Atom nomenclature | Details: HETATM
  • 2013-10-30
    Type: Entry title | Details: TITLE
  • 2013-10-30
    Type: Other | Details: REMARK 465,REMARK 900,MASTER
  • 2013-10-30
    Type: Refinement description | Details: REMARK 3
  • 2013-10-30
    Type: Version format compliance | Details: REMARK 4
  • 2013-10-30
    Type: Geometry validation | Details: REMARK 500
  • 2013-10-30
    Type: Non-polymer description | Details: HETSYN,FORMUL,REMARK 620,HETNAM,HET
  • 2013-10-30
    Type: Data collection | Details: REMARK 200
  • 2013-10-30
    Type: Binding sites and description | Details: REMARK 800,SITE