1E39

FLAVOCYTOCHROME C3 FROM SHEWANELLA FRIGIDIMARINA HISTIDINE 365 MUTATED TO ALANINE

Structural Biology Knowledgebase: 1E39 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Observed: 0.181

Literature

Macromolecules
Sequence Display for 1E39

Classification: OXIDOREDUCTASE

Total Structure Weight: 64051.50

Macromolecule Entities
Molecule Chains Length Organism Details
FUMARATE REDUCTASE FLAVOPROTEIN SUBUNIT A 571 Shewanella frigidimarina EC#: 1.3.5.4 IUBMB
Mutation: H365A
Gene Name(s): fccA fcc3
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 5 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FAD
Query on FAD

A FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
HEC
Query on HEC

A HEME C
C34 H34 Fe N4 O4
HXQIYSLZKNYNMH-LJNAALQVSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
FUM
Query on FUM

A FUMARIC ACID
C4 H4 O4
VZCYOOQTPOCHFL-OWOJBTEDSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NA
Query on NA

A SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Observed: 0.181
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 45.57 α = 90.00
b = 92.17 β = 91.08
c = 78.49 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-06-07
  • Released Date: 2000-09-18
  • Deposition author(s): Doherty, M.K., Pealing, S.L., Miles, C.S., Moysey, R., Taylor, P., Walkinshaw, M.D., Reid, G.A., Chapman, S.K.

Revision History

  • 2011-08-24
    Type: Polymer description | Details: COMPND
  • 2011-08-24
    Type: Sequence database correspondence | Details: SEQADV,DBREF
  • 2011-08-24
    Type: Non-polymer description | Details: HETSYN,FORMUL
  • 2011-08-24
    Type: Geometry validation | Details: REMARK 500
  • 2011-08-24
    Type: Function and keywords | Details: KEYWDS
  • 2011-08-24
    Type: Other | Details: REMARK 465,REMARK 525,HEADER,REMARK 280,REMARK 610
  • 2011-08-24
    Type: Biological assembly | Details: REMARK 300,REMARK 350
  • 2011-08-24
    Type: Version format compliance | Details: REMARK 4