1E0P

L intermediate of bacteriorhodopsin


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.288
  • R-Value Work: 0.265

Literature

Macromolecules
Sequence Display for 1E0P

Classification: TRANSPORT

Total Structure Weight: 25274.97

Macromolecule Entities
Molecule Chains Length Organism Details
BACTERIORHODOPSIN, GROUND STATE A 228 Halobacterium salinarum Details: CONFORMER B IS GROUND STATE, CONFORMER A IS THE L-STATE FORM.
Gene Name(s): bop VNG_1467G
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Membrane Protein

Source: inferred by homology | Group: ALPHA-HELICAL

Subgroup Name: Bacterial and Algal Rhodopsins

Protein Name: Bacteriorhodopsin (BR)


Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
RET
Query on RET

A RETINAL
C20 H28 O
NCYCYZXNIZJOKI-OVSJKPMPSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.288
  • R-Value Work: 0.265
  • Space Group: P 63

Unit Cell:

Length (Å) Angle (°)
a = 60.96 α = 90.00
b = 60.96 β = 90.00
c = 109.97 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-04-04
  • Released Date: 2000-08-19
  • Deposition author(s): Royant, A., Edman, K., Ursby, T., Pebay-Peyroula, E., Landau, E.M., Neutze, R.

Revision History

  • 2011-05-08
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance