1E0D

UDP-N-ACETYLMURAMOYL-L-ALANINE:D-GLUTAMATE LIGASE

Structural Biology Knowledgebase: 1E0D SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.262
  • R-Value Work: 0.213

Literature

Macromolecules
Sequence Display for 1E0D

Classification: LIGASE

Total Structure Weight: 46985.77

Macromolecule Entities
Molecule Chains Length Organism Details
UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE A 437 Escherichia coli EC#: 6.3.2.9 IUBMB
Gene Name(s): murD b0088 JW0086
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.262
  • R-Value Work: 0.213
  • Space Group: P 43 21 2

Unit Cell:

Length (Å) Angle (°)
a = 69.16 α = 90.00
b = 69.16 β = 90.00
c = 196.71 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-03-24
  • Released Date: 2000-06-09
  • Deposition author(s): Fanchon, E., Bertrand, J., Chantalat, L., Dideberg, O.

Revision History

  • 2016-01-27
    Type: Citation | Details: JRNL
  • 2016-01-27
    Type: Non-polymer description | Details: FORMUL
  • 2016-01-27
    Type: Geometry validation | Details: REMARK 500
  • 2016-01-27
    Type: Secondary structure | Details: SHEET
  • 2016-01-27
    Type: Other | Details: REMARK 465,REMARK 525,MASTER,REMARK 280,REMARK 900
  • 2016-01-27
    Type: Biological assembly | Details: REMARK 300,REMARK 350
  • 2016-01-27
    Type: Version format compliance | Details: REMARK 4
  • 2016-01-27
    Type: Refinement description | Details: REMARK 3